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Investigating the early molecular events following exposure of lung cells to nanoparticles using advanced optical microscopies

Author(s): Hana Kokot (Author), Janez Štrancar (Supervisor)

Year: 2022

Type: Doctoral dissertation

The potential toxicity of nanoparticles in our environment and consumer products is currently determined by costly and timely animal-based testing, which limits the rate of nanoparticle testing, causing a desperate need for alternative testing strategies. A promising alternative – mechanism-based prediction – employs a set of high-throughput cell-based tests that …

The role of cystatin C in inflammatory response

Author(s): Monika Biasizzo (Author), Nataša Kopitar-Jerala (Supervisor)

Year: 2022

Type: Doctoral dissertation

Innate immune system acts as the first line of defence to protect the host against pathogens. The regulation of immune system and inflammatory response is crucial since dysregulated or sustained inflammation leads to pathological conditions, septic shock and tissue damage. Macrophages are innate immune cells that sense pathogens with pattern …

Protection of biomedical alloys by thin films of alumina and hafnia prepared by atomic layer deposition

Author(s): Ivan Spajić (Author), Ingrid Milošev (Supervisor)

Year: 2022

Type: Doctoral dissertation

One of the most commonly used metal materials for the manufacture of biomedical implants are stainless steel and titanium-based alloys. Due to the specific conditions and complex environment in the human body, different strategies have been employed to protect them and improve their functionality in vivo. In this thesis, a …

Time-efficient method for monitoring electrochemical energy conversion systems

Author(s): Gjorgji Nusev (Author), Pavle Boškoski (Supervisor)

Year: 2022

Type: Doctoral dissertation

According to the EU’s Green Deal plan, one of the main objectives for the EU is to become a net-zero greenhouse emission society by 2050. Achieving this goal requires advancements across many areas ranging from energy production, conversion, distribution and energy storage where the key role is taken by the …

Optical emission spectroscopy as a tool for monitoring cold atmospheric pressure plasma processes

Author(s): Andrea Jurov (Author), Uroš Cvelbar (Supervisor), Nataša Hojnik (Co-Supervisor)

Year: 2021

Type: Doctoral dissertation

Non-equilibrium atmospheric pressure plasmas are used in many areas, such as food and agriculture, plasma medicine, plasma surface modification, material synthesis and deposition. Because of their versatility, many plasma setups have been developed. Of greater interest are those that operate at atmospheric pressure, like atmospheric pressure plasma jets (APPJs). Regarding …

Development of methods for electrostatic immobilization and coupling different microbial cells

Author(s): Iaroslav Rybkin (Author), Aleš Lapanje (Supervisor), Tomaž Rijavec (Co-Supervisor)

Year: 2021

Type: Doctoral dissertation

Naturally formed microbial communities are present in the form of cellular aggregates that create a set of diverse biochemical pathways through cross-feeding between the members of the microbial community. One of the most important factors so that some biochemical reactions can occur is the appropriate spatial placement of a particular …

In silico approaches to understand and predict the ligand-binding interactions of the human P-glycoprotein (ABCB1) membrane transporter

Author(s): Liadys Mora Lagares (Author), Marjana Novič (Supervisor), Emilio Benfenati (Co-Supervisor)

Year: 2021

Type: Doctoral dissertation

The P-glycoprotein (P-gp) is responsible for the elimination of a wide variety of substances from the cell, thus it is thought to play an important role in detoxification functions. The P-gp also affects the ADMET (absorption, distribution, metabolism, excretion, and toxicity in pharmacokinetics) properties of drugs. It is involved in …

Development of novel 3D in vitro cell models for genotoxicity assessment

Author(s): Martina Štampar (Author), Bojana Žegura (Supervisor)

Year: 2021

Type: Doctoral dissertation

The determination of genotoxicity is an important element in the safety assessment of various substances, with the purpose of preventing a number of chemicals from affecting human health. Genotoxicity testing is required for all classes of chemicals, drugs and biological agents, which can lead to a wide range of diseases, …

Knowledge discovery in a service-oriented data mining environment

Author(s): Vid Podpečan (Author), Nada Lavrač (Supervisor)

Year: 2013

Type: Doctoral dissertation

The thesis addresses the development of novel knowledge discovery scenarios in a modern data mining platform by utilising principles of service-oriented architecture with web services, interactive scientific workflows, knowledge discovery ontologies and automated construction of data mining workflows. We present the developed Orange4WS platform which upgrades Orange, a mature open-source …

Role and significance of cysteine cathepsins in TRAIL induced apoptosis

Author(s): Aleš Špes (Author), Vito Turk (Supervisor), Boris Turk (Co-Supervisor)

Year: 2012

Type: Doctoral dissertation

Apoptosis is an innate mechanism by which a multicellular organisms eliminates unwanted, damaged and potentially harmful cells. During apoptosis inflammation of the surrounding tissues is prevented. Defects in an apoptotic signaling can lead to numerous pathological conditions. Apoptosis is mediated through two main pathways, the extrinsic or the death receptor …