Search Results (64)
Development of an alternative approach to membrane protein structure determination based on the analysis of local rotational conformational spaces
The problem of structure determination of membrane proteins is addressed with a new combination of site-directed spin labelling (SDSL) electron paramagnetic resonance (EPR) spectroscopy and structure modelling of a protein and its conformational spaces. This new approach is aimed at structural characterization of membrane proteins and intrinsically disordered proteins. In …
Network Models of Self-Assembled Functional Materials
The fabrication of functional materials composed of metallic nanoparticles is one of the most important steps in the contemporary nanotechnology. Nonlinear selfassembly of nanoparticles into macroscopic aggregates are promising methods in which various structures can be obtained by tuning certain control parameters. Such large-scale aggregates exhibit new physical features, which …
PURY: A Topology and geometry parameter library for small molecules
The number and variety of macromolecular structures in complexes with "hetero" ligands is growing. The need for fast delivery of correct geometric parameters for their refinement, which is often crucial for understanding the biological relevance of the structure, is growing correspondingly. The current standard for describing protein structures is the …
Automatic text parsing aided by clause splitting and intra-clausal coordination detection
In language technologies, syntactic parsing represents one of the possible intermediate steps of text analysis in the applications such as machine translation, information extraction, question answering, etc. Syntactic trees are often used to demonstrate the structure of text. In the last decades, the dependency framework became a popular syntactic representation, …