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Development and employment of untargeted and targeted tools for virus detection in the frame of water-based epidemiology

Author(s): Olivera Maksimović (Author), Jon Gutiérrez-Aguirre (Supervisor), Denis Kutnjak (Co-Supervisor)

Year: 2023

Type: Doctoral dissertation

Traditional methods of studying viruses are limited in their ability to detect novel pathogens, but recent advances in high-throughput sequencing (HTS) are changing that. HTS allows researchers to probe deeply into the virome of various hosts and environments, identifying known and unknown viral species. However, a targeted approach, like quantitative …

Characterization of plant viromes using different viral nucleic acids enrichment strategies and high-throughput sequencing platforms

Author(s): Anja Pecman (Author), Maja Ravnikar (Supervisor), Ion Gutiérrez Aguirre (Co-Supervisor)

Year: 2022

Type: Doctoral dissertation

Plant viruses are very important plant pathogens, causing economic losses by infecting cultivated plants, causing diseases, and consequently reducing crop quality and quantity. In recent years, the development of high throughput sequencing (HTS) technologies has dramatically broadened the possibilities for plant virus research and diagnostics, enabling the discovery of new …

Inactivation of viruses in water by cold atmospheric plasma

Author(s): Arijana Filipić (Author), Jana Žel (Supervisor), David Dobnik (Co-Supervisor)

Year: 2021

Type: Doctoral dissertation

Access to clean water is a key requirement for a good quality of life. However, due to climate change, population growth and lack of proper water treatment, the availability of clean water is in constant decline. Among the many waterborne contaminants, viruses present an increasing concern. Human waterborne viruses infect …