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Naturally formed microbial communities are present in the form of cellular aggregates that create a set of diverse biochemical pathways through cross-feeding between the members of the microbial community. One of the most important factors so that some biochemical reactions can occur is the appropriate spatial placement of a particular …

One of the prevailing tendencies in science is research over-specialization, resulting in deep but relatively isolated islands of knowledge. Due to the huge amounts of scientific information produced at an increasingly fast pace, it has become difficult to follow even the specific literature limited to a single domain of specialization. …

The domain of data mining (DM) deals with analyzing different types of data. The data typically used in data mining is in the format of a single table, with primitive datatypes as attributes. However, structured (complex) data, such as graphs, sequences, networks, text, image, multimedia and relational data, are receiving …

In this thesis we present the development of the device for the removal of carbon deposits in fusion reactors. Amorphous hydrogenated carbon deposits (a-C:H) represent a major problem for smooth operation of future fusion reactors with divertors containing carbon tiles, because they cause retention of radioactive tritium. There are techniques …

The task of mathematical modeling of dynamic systems from observed system behavior, widely known under the name of system identification, breaks down into two subtasks. The first task, referred to as structure identification, is to specify the model structure, i.e., the functional form of the model. In practice, the model …

In computer science, ontologies enable formalized knowledge representation. The goal of ontology extension is to correctly augment the existing ontology with new formalized knowledge (e.g., concepts, relationships etc.). This thesis addresses the ontology extension process based on text mining methods. News analysis is the application of the extended ontology. A …

Engineered nanofibers and nanoparticles are recognized as capable of inducing cellular perturbations according to the oxidative stress paradigm or by interacting directly with biological membranes. A number of authors in their investigations with the nanofibres and nanoparticles has reported the ability of nanofibers and nanotparticle to cause the different damage …

Simulation models are a widely used tool for modelling and simulating systems for which it is hard to obtain real data. However, the simulation models are usually complex and it is not an easy task to induce new knowledge and find relationships and dependencies among different parts (parameters, processes, modules) …

This thesis presents studies of ultrafast carrier relaxation dynamics in charge density wave (CDW) materials by means of femtosecond time-resolved optical spectroscopy. In these experiments, a femtosecond pump pulse excites electrons via interband transitions, thereby changing the optical properties of the material. The dynamics of relaxation processes is then recorded …

Microarrays are at the center of a revolution in biotechnology, allowing researchers to simultaneously monitor the expression of tens of thousands of genes. The final aim of a typical microarray experiment is to find a molecular explanation for a given macroscopic observation (e.g., which pathways are affected by the loss …